STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cul1Cullin 1. (776 aa)    
Predicted Functional Partners:
Rbx1
Ring-box 1.
    
 0.999
Skp2
S-phase kinase associated protein 2.
    
 0.999
Btrc
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 0.998
Ubxn7
UBX domain protein 7.
   
 0.998
Fbxw11
F-box and WD repeat domain containing 11.
    
 0.995
Cand1
Cullin associated and neddylation dissociated 1.
   
 0.994
Cdk2
Cyclin dependent kinase 2.
    
 0.991
Fbxl17
F-box and leucine rich repeat protein 17.
    
 0.990
Ube2m
Ubiquitin conjugating enzyme E2 M.
    
 0.990
Fbxw7
F-box and WD repeat domain containing 7.
    
 0.989
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.