STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ifrd2Interferon related developmental regulator 2. (441 aa)    
Predicted Functional Partners:
Fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.993
Commd2
COMM domain containing 2.
    
 0.909
Kxd1
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.900
Rps3
Ribosomal protein S3.
    
   0.894
Rps29
Ribosomal protein S29.
    
   0.894
Commd1
Copper metabolism domain containing 1.
    
 0.893
Commd10
COMM domain containing 10.
    
 0.892
Ccdc22
Coiled-coil domain containing 22.
    
 0.870
ENSMOCP00000000250
annotation not available
    
  0.859
LOC101983222
Ubiquitin.
    
  0.859
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.