STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snx24Sorting nexin 24. (169 aa)    
Predicted Functional Partners:
Snx22
Sorting nexin 22.
    
  
0.709
Gapvd1
GTPase activating protein and VPS9 domains 1.
    
 
 0.707
Csnk1a1
Casein kinase 1 alpha 1.
    
   0.674
Snx11
Sorting nexin 11.
     
 0.649
Spata46
Spermatogenesis associated 46.
    
   0.586
Csnk1e
Casein kinase I.
    
   0.564
Stx6
Syntaxin 6.
    
 0.534
Stx8
Syntaxin 8.
    
 0.534
Snx10
Sorting nexin 10.
     
 0.514
Rint1
RAD50 interactor 1.
   
 
  0.506
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.