STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tnni2Troponin I2, fast skeletal type. (190 aa)    
Predicted Functional Partners:
Tnnc2
Troponin C2, fast.
   
 0.999
Tnnt3
Troponin T3, fast skeletal type.
   
 0.997
Tnnc1
Troponin C1, slow skeletal and cardiac type.
   
 0.990
Tnnt2
Troponin T2, cardiac type.
   
 0.987
Tnnt1
Troponin T1, skeletal, slow.
   
 0.985
Myl1
Myosin light chain 1.
   
 0.977
Atp2a1
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1.
   
 0.976
Mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.966
Smim20
Small integral membrane protein 20.
   
 0.963
Actn3
Actinin alpha 3.
   
 0.937
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.