STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mrpl57Mitochondrial ribosomal protein L57. (102 aa)    
Predicted Functional Partners:
Gadd45gip1
GADD45G interacting protein 1.
   
   0.957
Mrpl40
Mitochondrial ribosomal protein L40.
   
   0.953
Mrpl50
Mitochondrial ribosomal protein L50.
    
   0.951
Mrpl4
Mitochondrial ribosomal protein L4.
    
   0.949
Mrpl30
Mitochondrial ribosomal protein L30.
   
   0.946
Mrpl10
Mitochondrial ribosomal protein L10.
    
   0.945
Mrpl28
Mitochondrial ribosomal protein L28.
    
   0.943
Mrpl41
Mitochondrial ribosomal protein L41.
   
 
 0.943
Mrps30
Mitochondrial ribosomal protein S30.
    
   0.942
Mrpl39
Mitochondrial ribosomal protein L39.
    
   0.942
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.