STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abca12ATP binding cassette subfamily A member 12. (2596 aa)    
Predicted Functional Partners:
Cox15
Cytochrome c oxidase assembly protein COX15 homolog.
    
 0.704
Gbe1
1,4-alpha-glucan branching enzyme 1.
   
 
  0.668
ENSMOCP00000004850
annotation not available
    
 0.629
Nr1h2
Nuclear receptor subfamily 1 group H member 2.
    
 0.629
Pdk3
Pyruvate dehydrogenase kinase 3.
    
 0.625
Pdk4
Pyruvate dehydrogenase kinase 4.
    
 0.625
Bckdk
Branched chain keto acid dehydrogenase kinase.
    
 0.625
ENSMOCP00000017549
annotation not available
    
 0.625
Pdk2
Pyruvate dehydrogenase kinase 2.
    
 0.625
Pdk1
Pyruvate dehydrogenase kinase 1.
    
 0.625
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.