STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Wdr6WD repeat domain 6. (1126 aa)    
Predicted Functional Partners:
Ftsj1
FtsJ RNA 2'-O-methyltransferase 1.
   
 
 0.962
ENSMOCP00000023949
annotation not available
   
 
 0.962
ENSMOCP00000024958
annotation not available
   
 
 0.962
Mrm2
Mitochondrial rRNA methyltransferase 2.
   
 
 0.952
Utp15
UTP15 small subunit processome component.
   
    0.921
Ftsj3
FtsJ RNA 2'-O-methyltransferase 3.
   
 
 0.916
Smim12
Small integral membrane protein 12.
   
   0.841
ENSMOCP00000004868
annotation not available
   
    0.835
ENSMOCP00000021717
annotation not available
   
    0.835
Wdr36
WD repeat domain 36.
   
    0.830
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.