STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krt80Keratin 80. (452 aa)    
Predicted Functional Partners:
Krt20
Keratin 20.
    
0.677
Krt7
Keratin 7.
  
 
0.662
Krt8
Keratin 8.
  
 
 
0.632
Krt4
Keratin 4.
    
 
0.580
Krt84
Keratin 84.
    
 
0.570
Krt82
Keratin 82.
    
 
0.570
Krt19
Keratin 19.
   
 
0.566
Krt32
Keratin 32.
    
0.549
Sowahc
Sosondowah ankyrin repeat domain family member C.
      
 0.541
1700007K13Rik
Chromosome 4 C9orf116 homolog.
      
 0.541
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.