STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atp5eATP synthase F1 subunit epsilon. (51 aa)    
Predicted Functional Partners:
Atp5a1
ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1.
   
 0.999
Atp5o
ATP synthase peripheral stalk subunit OSCP.
   
 0.999
Atp5h
ATP synthase peripheral stalk subunit d.
   
 0.999
Atp5d
ATP synthase F1 subunit delta.
   
 0.999
Atp5c1
ATP synthase F1 subunit gamma.
   
 0.999
Atp5j
ATP synthase peripheral stalk subunit F6.
   
 0.998
ATP6
ATP synthase F0 subunit 6.
    
 0.997
ENSMOCP00000004489
annotation not available
   
 0.995
Atp5j2
ATP synthase membrane subunit f.
   
 0.995
ENSMOCP00000007675
annotation not available
   
 0.994
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.