STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ArsaArylsulfatase A. (506 aa)    
Predicted Functional Partners:
Med7
Mediator complex subunit 7.
    
 
 0.941
Med6
Mediator complex subunit 6.
    
 
 0.941
Med31
Mediator complex subunit 31.
    
 
 0.929
Med10
Mediator complex subunit 10.
    
 
 0.927
Arsb
Arylsulfatase B.
  
0.918
Galc
Galactosylceramidase.
     
 0.916
LOC102002730
Mediator of RNA polymerase II transcription subunit 14-like.
    
 
 0.909
Med14
Mediator complex subunit 14.
    
 
 0.909
Neu3
Neuraminidase 3.
  
 
 0.902
Sumf1
Sulfatase modifying factor 1.
  
 
 0.901
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.