STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fhad1Forkhead-associated (FHA) phosphopeptide binding domain 1. (1414 aa)    
Predicted Functional Partners:
Zfp407
Zinc finger protein 407.
      
 0.603
Sel1l3
SEL1L family member 3.
      
 0.559
Susd4
Sushi domain containing 4.
      
 0.556
Armc3
Armadillo repeat containing 3.
   
  
 0.463
Gldc
Glycine decarboxylase.
      
 0.449
Gna12
G protein subunit alpha 12.
      
 0.447
Bcas3
BCAS3 microtubule associated cell migration factor.
      
 0.434
ENSMOCP00000026003
annotation not available
      
 0.434
Ttc34
Tetratricopeptide repeat domain 34.
      
 0.430
Vegfd
Vascular endothelial growth factor D.
  
     0.415
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.