STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ush1cUSH1 protein network component harmonin. (891 aa)    
Predicted Functional Partners:
Ush1g
USH1 protein network component sans.
    
 0.992
Myo7a
Myosin VIIA.
   
 0.988
Anks4b
Ankyrin repeat and sterile alpha motif domain containing 4B.
    
 0.986
Myo7b
Myosin VIIB.
   
 0.981
Cdh23
Cadherin related 23.
   
 
 0.975
Cdhr2
Cadherin related family member 2.
   
 
 0.946
Myo15
Myosin XVA.
   
 0.901
Myo15b
Myosin XVB.
   
 0.885
Myo10
Myosin X.
   
 0.829
Plekhh3
Pleckstrin homology, MyTH4 and FERM domain containing H3.
   
 0.829
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.