STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Scarb2Scavenger receptor class B member 2. (478 aa)    
Predicted Functional Partners:
Apob
Apolipoprotein B.
    
 0.863
Cd63
CD63 molecule.
     
 0.860
Tlr4
Toll like receptor 4.
   
 0.856
Tlr2
Toll like receptor 2.
   
 0.841
Thbs1
Thrombospondin 1.
   
 0.795
Cd9
CD9 molecule.
   
 0.768
Thbs2
Thrombospondin 2.
   
 0.755
Cd53
CD53 molecule.
   
 
 0.749
Tfrc
Transferrin receptor.
     
 0.747
Vamp7
Vesicle associated membrane protein 7.
     
 0.746
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.