STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nudt7Nudix hydrolase 7. (231 aa)    
Predicted Functional Partners:
Naxe
NAD(P)HX epimerase.
  
 0.872
Edc3
Enhancer of mRNA decapping 3.
  
 0.871
Ak9
Adenylate kinase 9.
  
 0.871
Nudt12
Nudix hydrolase 12.
   
 0.870
Dcp1b
Decapping mRNA 1B.
    
 0.868
ENSMOCP00000025658
annotation not available
    
 0.868
Pmpca
Peptidase, mitochondrial processing alpha subunit.
   
   0.858
Patl1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.849
Patl2
PAT1 homolog 2.
    
 0.849
Edc4
Enhancer of mRNA decapping 4.
    
 0.842
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.