STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plxnb2Plexin B2. (470 aa)    
Predicted Functional Partners:
Sema4d
Semaphorin 4D.
    
 0.989
ENSMOCP00000009792
annotation not available
    
 0.983
Rhod
Ras homolog family member D.
    
 0.972
Rnd1
Rho family GTPase 1.
    
 0.970
Sema4c
Semaphorin 4C.
   
 0.961
Arhgef12
Rho guanine nucleotide exchange factor 12.
    
 0.959
Sema4g
Semaphorin 4G.
    
 0.946
Sema4a
Semaphorin 4A.
    
 0.943
Sema4b
Semaphorin 4B.
    
 0.939
Sema4f
Ssemaphorin 4F.
    
 0.928
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.