STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BfarBifunctional apoptosis regulator. (450 aa)    
Predicted Functional Partners:
ENSMOCP00000006669
annotation not available
    
 0.771
Bard1
BRCA1 associated RING domain 1.
   
 0.728
ENSMOCP00000000250
annotation not available
    
 0.724
LOC101983222
Ubiquitin.
    
 0.724
Kxd1
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.724
Trip12
Thyroid hormone receptor interactor 12.
    
 0.708
Cacul1
CDK2 associated cullin domain 1.
    
 0.697
Cul3
Cullin 3.
    
 0.697
Cul1
Cullin 1.
    
 0.697
Rps27a
Ribosomal protein S27a.
    
  0.688
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.