STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam118bFamily with sequence similarity 118 member B. (351 aa)    
Predicted Functional Partners:
ENSMOCP00000006826
annotation not available
   
  0.673
LOC101978915
enoyl-CoA delta isomerase 2, mitochondrial-like.
   
  0.673
Rnf146
Ring finger protein 146.
   
 0.667
ENSMOCP00000023868
annotation not available
   
 0.661
Katnal2
Katanin p60 subunit A-like 2.
   
 0.658
Wdr90
WD repeat domain 90.
    
 0.639
Ift22
Intraflagellar transport 22.
    
 0.619
Ift52
Intraflagellar transport 52.
   
 0.614
Ubxn7
UBX domain protein 7.
    
 0.610
Ift57
Intraflagellar transport 57.
    
 0.598
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.