STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pou6f1POU class 6 homeobox 1. (301 aa)    
Predicted Functional Partners:
Snapc4
Small nuclear RNA activating complex polypeptide 4.
    
  0.685
Nanog
Nanog homeobox.
    
 0.626
Bsx
Brain specific homeobox.
    
 0.626
Snapc3
Small nuclear RNA activating complex polypeptide 3.
   
 
  0.594
Cdk9
Cyclin dependent kinase 9.
     
 0.590
Pcf11
PCF11 cleavage and polyadenylation factor subunit.
     
 0.580
Polr2f
RNA polymerase II subunit F.
     
 0.568
Ep300
E1A binding protein p300.
    
 0.560
ENSMOCP00000002526
annotation not available
    
 0.555
Gtf2b
General transcription factor IIB.
    
 0.555
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.