STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc33a1Solute carrier family 33 member 1. (550 aa)    
Predicted Functional Partners:
B4galnt1
beta-1,4-N-acetyl-galactosaminyltransferase 1.
     
 0.854
St8sia5
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5.
     
 0.837
St8sia1
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1.
     
 0.837
Dnajb9
DnaJ heat shock protein family (Hsp40) member B9.
  
 
 0.831
B4galnt2
beta-1,4-N-acetyl-galactosaminyltransferase 2.
     
 0.829
Cyb5r4
Cytochrome b5 reductase 4.
    
  0.822
St8sia6
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6.
     
 0.799
Loxhd1
Lipoxygenase homology domains 1.
    
  0.765
Ephx2
Epoxide hydrolase 2.
    
 0.687
Nme8
NME/NM23 family member 8.
   
 0.670
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.