STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Coa5Cytochrome c oxidase assembly factor 5. (74 aa)    
Predicted Functional Partners:
LOC101987337
Cytochrome c oxidase copper chaperone.
   
  
 0.768
LOC101997498
Cytochrome c oxidase copper chaperone.
   
  
 0.768
Pet117
PET117 homolog.
   
  
 0.765
Timm9
Translocase of inner mitochondrial membrane 9.
   
  
 0.719
Mrpl51
Mitochondrial ribosomal protein L51.
   
  
 0.716
Cmc1
C-X9-C motif containing 1.
   
  
 0.715
ENSMOCP00000009703
annotation not available
   
  
 0.701
Mrps18c
Mitochondrial ribosomal protein S18C.
   
  
 0.701
Gfer
Growth factor, augmenter of liver regeneration.
   
  
 0.696
Polr2l
RNA polymerase II subunit L.
   
   0.694
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.