STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nlgn3Neuroligin 3. (848 aa)    
Predicted Functional Partners:
Nrxn2
Neurexin 2.
   
 0.978
ENSMOCP00000011182
annotation not available
   
 0.977
ENSMOCP00000014551
annotation not available
   
 0.960
Nrxn3
Neurexin 3.
   
 0.960
ENSMOCP00000015509
annotation not available
   
 0.935
Ptprd
Protein tyrosine phosphatase receptor type D.
    
 
 0.926
Nlgn1
Neuroligin 1.
  
0.913
Shank3
SH3 and multiple ankyrin repeat domains 3.
    
 0.902
Dlg4
Discs large MAGUK scaffold protein 4.
   
 0.902
Mdga1
MAM domain containing glycosylphosphatidylinositol anchor 1.
    
 
 0.878
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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