STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CaluCalumenin. (315 aa)    
Predicted Functional Partners:
Fam20c
FAM20C golgi associated secretory pathway kinase.
    
  0.733
Calr3
Calreticulin 3.
   
 
 0.624
Calr
Calreticulin.
   
 
 0.618
Hsp90b1
Heat shock protein 90 beta family member 1.
   
 0.616
Fam20b
FAM20B glycosaminoglycan xylosylkinase.
     
 0.607
Calr4
Calreticulin-like.
   
 
 0.601
Hspa5
Heat shock protein family A (Hsp70) member 5.
   
 
 0.582
Zwint
ZW10 interacting kinetochore protein.
    
   0.559
Aurka
Aurora kinase A.
    
   0.559
P4hb
Prolyl 4-hydroxylase subunit beta.
   
 
 0.549
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.