STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpl18Ribosomal protein L18. (189 aa)    
Predicted Functional Partners:
Fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.999
Rps3
Ribosomal protein S3.
  
 
 0.988
Rpl22
Ribosomal protein L22.
   
 0.988
Rps29
Ribosomal protein S29.
  
 
 0.987
Rpl12
Ribosomal protein L12.
   
 
 0.987
ENSMOCP00000000158
annotation not available
  
 0.986
Rpl24
Ribosomal protein L24.
  
 0.986
Rpl3
Ribosomal protein L3.
  
 0.982
ENSMOCP00000003130
annotation not available
   
 0.981
Rplp2
Ribosomal protein lateral stalk subunit P2.
   
 0.981
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.