STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
9530053A07RikRIKEN cDNA 9530053A07 gene. (2279 aa)    
Predicted Functional Partners:
Fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.930
Frem1
FRAS1 related extracellular matrix 1.
    
 0.781
Fras1
Fraser extracellular matrix complex subunit 1.
    
 0.771
Gle1
GLE1 RNA export mediator.
    
 0.755
Asf1a
Anti-silencing function 1A histone chaperone.
    
 0.710
Asf1b
Anti-silencing function 1B histone chaperone.
    
 0.710
Fas
Fas cell surface death receptor.
    
 0.673
ENSMOCP00000001963
annotation not available
   
  0.634
Rps21
Ribosomal protein S21.
   
  0.634
Hira
Protein HIRA.
    
 0.628
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.