STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gjb2Gap junction protein beta 2. (226 aa)    
Predicted Functional Partners:
Gjb6
Gap junction protein beta 6.
  
 
0.693
Gjb1
Gap junction protein beta 1.
      
0.607
Gja5
Gap junction protein alpha 5.
    
0.583
Slc26a4
Solute carrier family 26 member 4.
      
 0.550
Nanog
Nanog homeobox.
      
 0.548
Chrna10
Cholinergic receptor nicotinic alpha 10 subunit.
      
 0.541
Gja1
Gap junction protein alpha 1.
  
 
0.497
Gjb3
Gap junction protein beta 3.
  
 
0.481
Gja4
Gap junction protein alpha 4.
  
 
0.443
Sh3bp4
SH3 domain binding protein 4.
  
     0.443
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.