Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Corin | Dgcr2 | ENSMOCP00000027128 | ENSMOCP00000017735 | Corin, serine peptidase. | DiGeorge syndrome critical region gene 2. | 0.691 |
Corin | Egflam | ENSMOCP00000027128 | ENSMOCP00000017462 | Corin, serine peptidase. | EGF like, fibronectin type III and laminin G domains. | 0.493 |
Corin | Itsn2 | ENSMOCP00000027128 | ENSMOCP00000008222 | Corin, serine peptidase. | Intersectin 2. | 0.746 |
Corin | Met | ENSMOCP00000027128 | ENSMOCP00000006670 | Corin, serine peptidase. | MET proto-oncogene, receptor tyrosine kinase. | 0.901 |
Corin | Mst1r | ENSMOCP00000027128 | ENSMOCP00000007460 | Corin, serine peptidase. | Macrophage stimulating 1 receptor (c-met-related tyrosine kinase). | 0.901 |
Dgcr2 | Corin | ENSMOCP00000017735 | ENSMOCP00000027128 | DiGeorge syndrome critical region gene 2. | Corin, serine peptidase. | 0.691 |
Dgcr2 | Egflam | ENSMOCP00000017735 | ENSMOCP00000017462 | DiGeorge syndrome critical region gene 2. | EGF like, fibronectin type III and laminin G domains. | 0.702 |
Dgcr2 | Egfr | ENSMOCP00000017735 | ENSMOCP00000001207 | DiGeorge syndrome critical region gene 2. | Epidermal growth factor receptor. | 0.687 |
Dgcr2 | Itsn2 | ENSMOCP00000017735 | ENSMOCP00000008222 | DiGeorge syndrome critical region gene 2. | Intersectin 2. | 0.747 |
Dgcr2 | Lrpap1 | ENSMOCP00000017735 | ENSMOCP00000001351 | DiGeorge syndrome critical region gene 2. | LDL receptor related protein associated protein 1. | 0.711 |
Dgcr2 | Met | ENSMOCP00000017735 | ENSMOCP00000006670 | DiGeorge syndrome critical region gene 2. | MET proto-oncogene, receptor tyrosine kinase. | 0.761 |
Dgcr2 | Mst1r | ENSMOCP00000017735 | ENSMOCP00000007460 | DiGeorge syndrome critical region gene 2. | Macrophage stimulating 1 receptor (c-met-related tyrosine kinase). | 0.761 |
Dgcr2 | Pcsk9 | ENSMOCP00000017735 | ENSMOCP00000015024 | DiGeorge syndrome critical region gene 2. | Proprotein convertase subtilisin/kexin type 9. | 0.694 |
Dgcr2 | Reln | ENSMOCP00000017735 | ENSMOCP00000013909 | DiGeorge syndrome critical region gene 2. | Reelin. | 0.748 |
Dgcr2 | Sacm1l | ENSMOCP00000017735 | ENSMOCP00000010218 | DiGeorge syndrome critical region gene 2. | SAC1 like phosphatidylinositide phosphatase. | 0.694 |
Egflam | Corin | ENSMOCP00000017462 | ENSMOCP00000027128 | EGF like, fibronectin type III and laminin G domains. | Corin, serine peptidase. | 0.493 |
Egflam | Dgcr2 | ENSMOCP00000017462 | ENSMOCP00000017735 | EGF like, fibronectin type III and laminin G domains. | DiGeorge syndrome critical region gene 2. | 0.702 |
Egflam | Met | ENSMOCP00000017462 | ENSMOCP00000006670 | EGF like, fibronectin type III and laminin G domains. | MET proto-oncogene, receptor tyrosine kinase. | 0.621 |
Egflam | Mst1r | ENSMOCP00000017462 | ENSMOCP00000007460 | EGF like, fibronectin type III and laminin G domains. | Macrophage stimulating 1 receptor (c-met-related tyrosine kinase). | 0.621 |
Egfr | Dgcr2 | ENSMOCP00000001207 | ENSMOCP00000017735 | Epidermal growth factor receptor. | DiGeorge syndrome critical region gene 2. | 0.687 |
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