STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Brd2Bromodomain containing 2. (797 aa)    
Predicted Functional Partners:
Brd3
Bromodomain containing 3.
  
 
 
0.934
Brd4
Bromodomain containing 4.
  
 
0.889
E2f1
E2F transcription factor 1.
    
 
 0.868
Cdk9
Cyclin dependent kinase 9.
    
 
 0.843
Taf7
TATA-box binding protein associated factor 7.
    
 
 0.781
Taf7l
TATA-box binding protein associated factor 7 like.
    
 
 0.781
Dmap1
DNA methyltransferase 1 associated protein 1.
    
 
 0.773
Jmjd6
Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.
    
 
 0.770
Ccnt1
Cyclin T1.
   
 
 0.761
Taf1
TATA-box binding protein associated factor 1.
    
 
0.751
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.