STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pfdn1Prefoldin subunit 1. (122 aa)    
Predicted Functional Partners:
Pfdn6
Prefoldin subunit 6.
   
 0.999
Pfdn2
Prefoldin subunit 2.
   
 0.998
Vbp1
VHL binding protein 1.
   
 0.997
ENSMOCP00000002940
annotation not available
   
 0.994
LOC101990756
Prefoldin subunit 5-like.
   
 0.994
Pfdn5
Prefoldin subunit 5.
   
 0.994
ENSMOCP00000000293
annotation not available
   
 0.992
LOC101998694
Prefoldin subunit 4.
   
 0.992
Tcp1
T-complex 1.
   
 0.961
Cct4
Chaperonin containing TCP1 subunit 4.
   
 0.957
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.