STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ahdc1AT-hook DNA binding motif containing 1. (1597 aa)    
Predicted Functional Partners:
Scai
Suppressor of cancer cell invasion.
    
 
 0.573
Cbx1
Chromobox 1.
    
   0.501
ENSMOCP00000016071
annotation not available
    
   0.450
LOC101980475
Chromobox protein homolog 5-like.
    
   0.450
Ddx23
DEAD-box helicase 23.
   
   0.447
Scpep1
Serine carboxypeptidase 1.
      
 0.438
Pold2
DNA polymerase delta 2, accessory subunit.
      
 0.435
Huwe1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
      
 0.429
Cbx3
Chromobox 3.
    
   0.410
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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