STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ube2e3Ubiquitin conjugating enzyme E2 E3. (207 aa)    
Predicted Functional Partners:
ENSMOCP00000019583
annotation not available
   
 0.980
ENSMOCP00000022601
annotation not available
   
 0.980
Trip12
Thyroid hormone receptor interactor 12.
   
 0.974
Fancm
FA complementation group M.
    
 0.916
Birc6
Baculoviral IAP repeat containing 6.
   
 0.906
Gcdh
glutaryl-CoA dehydrogenase.
 
 
  0.897
Rlim
Ring finger protein, LIM domain interacting.
    
 0.881
ENSMOCP00000020359
annotation not available
   
 0.862
Prkn
Parkin RBR E3 ubiquitin protein ligase.
    
 0.857
ENSMOCP00000000521
annotation not available
  
 0.853
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.