Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Agrn | Hspg2 | ENSMOCP00000012023 | ENSMOCP00000008864 | Agrin. | Heparan sulfate proteoglycan 2. | 0.672 |
Agrn | Nid2 | ENSMOCP00000012023 | ENSMOCP00000018292 | Agrin. | Nidogen 2. | 0.839 |
Cyb5r4 | Nid2 | ENSMOCP00000014740 | ENSMOCP00000018292 | Cytochrome b5 reductase 4. | Nidogen 2. | 0.759 |
Egflam | Lama2 | ENSMOCP00000017462 | ENSMOCP00000019621 | EGF like, fibronectin type III and laminin G domains. | Laminin, alpha 2. | 0.415 |
Egflam | Lama4 | ENSMOCP00000017462 | ENSMOCP00000007541 | EGF like, fibronectin type III and laminin G domains. | Laminin subunit alpha 4. | 0.415 |
Egflam | Lama5 | ENSMOCP00000017462 | ENSMOCP00000019189 | EGF like, fibronectin type III and laminin G domains. | Laminin subunit alpha 5. | 0.415 |
Egflam | Nid2 | ENSMOCP00000017462 | ENSMOCP00000018292 | EGF like, fibronectin type III and laminin G domains. | Nidogen 2. | 0.745 |
Hspg2 | Agrn | ENSMOCP00000008864 | ENSMOCP00000012023 | Heparan sulfate proteoglycan 2. | Agrin. | 0.672 |
Hspg2 | Lama2 | ENSMOCP00000008864 | ENSMOCP00000019621 | Heparan sulfate proteoglycan 2. | Laminin, alpha 2. | 0.541 |
Hspg2 | Lama4 | ENSMOCP00000008864 | ENSMOCP00000007541 | Heparan sulfate proteoglycan 2. | Laminin subunit alpha 4. | 0.499 |
Hspg2 | Lama5 | ENSMOCP00000008864 | ENSMOCP00000019189 | Heparan sulfate proteoglycan 2. | Laminin subunit alpha 5. | 0.520 |
Hspg2 | Lamc1 | ENSMOCP00000008864 | ENSMOCP00000009615 | Heparan sulfate proteoglycan 2. | Laminin subunit gamma 1. | 0.582 |
Hspg2 | Lamc3 | ENSMOCP00000008864 | ENSMOCP00000025044 | Heparan sulfate proteoglycan 2. | Laminin subunit gamma 3. | 0.534 |
Hspg2 | Nid2 | ENSMOCP00000008864 | ENSMOCP00000018292 | Heparan sulfate proteoglycan 2. | Nidogen 2. | 0.969 |
Lama2 | Egflam | ENSMOCP00000019621 | ENSMOCP00000017462 | Laminin, alpha 2. | EGF like, fibronectin type III and laminin G domains. | 0.415 |
Lama2 | Hspg2 | ENSMOCP00000019621 | ENSMOCP00000008864 | Laminin, alpha 2. | Heparan sulfate proteoglycan 2. | 0.541 |
Lama2 | Lama4 | ENSMOCP00000019621 | ENSMOCP00000007541 | Laminin, alpha 2. | Laminin subunit alpha 4. | 0.795 |
Lama2 | Lama5 | ENSMOCP00000019621 | ENSMOCP00000019189 | Laminin, alpha 2. | Laminin subunit alpha 5. | 0.791 |
Lama2 | Lamc1 | ENSMOCP00000019621 | ENSMOCP00000009615 | Laminin, alpha 2. | Laminin subunit gamma 1. | 0.962 |
Lama2 | Lamc2 | ENSMOCP00000019621 | ENSMOCP00000024782 | Laminin, alpha 2. | Laminin subunit gamma 2. | 0.969 |
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