STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tma16Translation machinery associated 16 homolog. (224 aa)    
Predicted Functional Partners:
Gtpbp4
GTP binding protein 4.
   
 
 0.983
Gnl2
Guanine nucleotide binding protein-like 2 (nucleolar).
   
 
 0.944
Zfp593
Zinc finger protein 593.
   
 
 0.937
Nmd3
NMD3 ribosome export adaptor.
   
 
 0.899
ENSMOCP00000003619
annotation not available
   
 
 0.891
Rsl24d1
Ribosomal L24 domain containing 1.
   
 
 0.891
LOC101979876
Probable ribosome biogenesis protein RLP24.
   
 
 0.891
ENSMOCP00000024600
annotation not available
   
 
 0.891
Rrp15
Ribosomal RNA processing 15 homolog.
   
  
 0.888
Krr1
KRR1 small subunit processome component homolog.
   
   0.886
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.