STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dmtf1Cyclin D binding myb like transcription factor 1. (760 aa)    
Predicted Functional Partners:
Polr1e
RNA polymerase I subunit E.
    
 0.789
Polr1c
RNA polymerase I and III subunit C.
    
  0.783
Znrd1
Zinc ribbon domain containing 1.
    
 0.774
Taf1
TATA-box binding protein associated factor 1.
    
 0.769
Twistnb
TWIST neighbor.
    
 0.755
Cd3eap
CD3e molecule associated protein.
    
  0.748
Polr2c
RNA polymerase II subunit C.
    
  0.746
Polr1a
RNA polymerase I subunit A.
    
 0.732
Btaf1
B-TFIID TATA-box binding protein associated factor 1.
   
 
 0.725
Cavin1
Caveolae associated protein 1.
    
 0.701
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.