STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gm29133Predicted gene 29133. (272 aa)    
Predicted Functional Partners:
Adgrl3
Adhesion G protein-coupled receptor L3.
    
 
 0.885
Adgrl2
Adhesion G protein-coupled receptor L2.
    
 
 0.885
Adgrl1
Adhesion G protein-coupled receptor L1.
    
 
 0.885
Ntng1
Netrin G1.
    
 0.747
Ppp1ca
Protein phosphatase 1 catalytic subunit alpha.
   
 0.698
ENSMOCP00000003918
annotation not available
   
 0.698
Ppp1cc
Protein phosphatase 1 catalytic subunit gamma.
   
 0.698
Ppp1cb
Protein phosphatase 1 catalytic subunit beta.
   
 0.698
Cask
Calcium/calmodulin dependent serine protein kinase.
    
  0.692
Nme8
NME/NM23 family member 8.
    
  0.677
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.