STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atpaf1ATP synthase mitochondrial F1 complex assembly factor 1. (347 aa)    
Predicted Functional Partners:
Atpaf2
ATP synthase mitochondrial F1 complex assembly factor 2.
   
 
 0.821
Atp5a1
ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1.
    
 
 0.690
ENSMOCP00000005096
annotation not available
    
 
 0.685
Atp5f1b
ATP synthase F1 subunit beta.
    
 
 0.685
Cdca8
Cell division cycle associated 8.
    
 
 0.680
Pdhb
Pyruvate dehydrogenase E1 beta subunit.
   
   0.635
Atp5c1
ATP synthase F1 subunit gamma.
   
  
 0.613
ENSMOCP00000018082
annotation not available
   
    0.607
ENSMOCP00000024879
annotation not available
   
    0.607
Ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
   
    0.607
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.