STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMOCP00000019016annotation not available (117 aa)    
Predicted Functional Partners:
Snrpd3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.995
Snrpd1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.995
Snrpe
Small nuclear ribonucleoprotein polypeptide E.
   
 0.995
Lsm2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.992
ENSMOCP00000014708
annotation not available
   
 0.988
Snrpg
Small nuclear ribonucleoprotein polypeptide G.
   
 0.988
Sf3b5
Splicing factor 3b subunit 5.
   
 0.987
Lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.987
Snrpn
Small nuclear ribonucleoprotein polypeptide N.
   
 0.984
Lsm10
LSM10, U7 small nuclear RNA associated.
   
 0.983
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.