STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hs6st3Heparan sulfate 6-O-sulfotransferase 3. (470 aa)    
Predicted Functional Partners:
Sdc1
Syndecan 1.
     
 0.725
Gpc5
Glypican 5.
     
 0.592
Gpc3
Glypican 3.
     
 0.592
Gpc1
Glypican 1.
     
 0.590
Gpc4
Glypican 4.
     
 0.590
Gpc6
Glypican 6.
     
 0.590
ENSMOCP00000026732
annotation not available
     
 0.590
Glce
Glucuronic acid epimerase.
    
 
 0.569
Sdc3
Syndecan 3.
     
 0.563
Agrn
Agrin.
     
 0.533
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.