STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ddrgk1DDRGK domain containing 1. (315 aa)    
Predicted Functional Partners:
Cdk5rap3
CDK5 regulatory subunit associated protein 3.
    
 
 0.970
Ufl1
UFM1 specific ligase 1.
    
 
 0.966
Ufc1
Ubiquitin-fold modifier conjugating enzyme 1.
    
 
 0.866
Ufm1
Ubiquitin fold modifier 1.
    
 
 0.773
Srpr
SRP receptor subunit alpha.
    
 
 0.694
Ufsp2
UFM1 specific peptidase 2.
    
 
 0.682
Lman1
Lectin, mannose binding 1.
    
  0.650
Tm7sf2
Transmembrane 7 superfamily member 2.
    
  0.635
Dhcr7
7-dehydrocholesterol reductase.
    
  0.635
Lman1l
Lectin, mannose binding 1 like.
    
  0.628
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.