Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Amn | Cblif | ENSMOCP00000002411 | ENSMOCP00000002197 | Amnionless. | Gastric intrinsic factor. | 0.748 |
Amn | ENSMOCP00000019141 | ENSMOCP00000002411 | ENSMOCP00000019141 | Amnionless. | annotation not available | 0.900 |
Amn | Tcn2 | ENSMOCP00000002411 | ENSMOCP00000025546 | Amnionless. | Transcobalamin 2. | 0.593 |
Bmp1 | Col1a1 | ENSMOCP00000008581 | ENSMOCP00000026170 | Bone morphogenetic protein 1. | Collagen type I alpha 1 chain. | 0.614 |
Bmp1 | Col1a2 | ENSMOCP00000008581 | ENSMOCP00000009401 | Bone morphogenetic protein 1. | Collagen type I alpha 2 chain. | 0.626 |
Bmp1 | Col3a1 | ENSMOCP00000008581 | ENSMOCP00000003146 | Bone morphogenetic protein 1. | Collagen type III alpha 1 chain. | 0.663 |
Bmp1 | Col5a2 | ENSMOCP00000008581 | ENSMOCP00000002784 | Bone morphogenetic protein 1. | Collagen type V alpha 2 chain. | 0.604 |
Bmp1 | ENSMOCP00000019141 | ENSMOCP00000008581 | ENSMOCP00000019141 | Bone morphogenetic protein 1. | annotation not available | 0.826 |
Bmp1 | Tll2 | ENSMOCP00000008581 | ENSMOCP00000015710 | Bone morphogenetic protein 1. | Tolloid like 2. | 0.606 |
Cblif | Amn | ENSMOCP00000002197 | ENSMOCP00000002411 | Gastric intrinsic factor. | Amnionless. | 0.748 |
Cblif | ENSMOCP00000019141 | ENSMOCP00000002197 | ENSMOCP00000019141 | Gastric intrinsic factor. | annotation not available | 0.885 |
Cblif | Tcn2 | ENSMOCP00000002197 | ENSMOCP00000025546 | Gastric intrinsic factor. | Transcobalamin 2. | 0.841 |
Col1a1 | Bmp1 | ENSMOCP00000026170 | ENSMOCP00000008581 | Collagen type I alpha 1 chain. | Bone morphogenetic protein 1. | 0.614 |
Col1a1 | Col1a2 | ENSMOCP00000026170 | ENSMOCP00000009401 | Collagen type I alpha 1 chain. | Collagen type I alpha 2 chain. | 0.998 |
Col1a1 | Col3a1 | ENSMOCP00000026170 | ENSMOCP00000003146 | Collagen type I alpha 1 chain. | Collagen type III alpha 1 chain. | 0.995 |
Col1a1 | Col5a2 | ENSMOCP00000026170 | ENSMOCP00000002784 | Collagen type I alpha 1 chain. | Collagen type V alpha 2 chain. | 0.971 |
Col1a1 | Col6a2 | ENSMOCP00000026170 | ENSMOCP00000007339 | Collagen type I alpha 1 chain. | Collagen type VI alpha 2 chain. | 0.974 |
Col1a1 | ENSMOCP00000019141 | ENSMOCP00000026170 | ENSMOCP00000019141 | Collagen type I alpha 1 chain. | annotation not available | 0.875 |
Col1a1 | Tll2 | ENSMOCP00000026170 | ENSMOCP00000015710 | Collagen type I alpha 1 chain. | Tolloid like 2. | 0.561 |
Col1a2 | Bmp1 | ENSMOCP00000009401 | ENSMOCP00000008581 | Collagen type I alpha 2 chain. | Bone morphogenetic protein 1. | 0.626 |
page 1 of 4