STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Msh6mutS homolog 6. (1361 aa)    
Predicted Functional Partners:
Msh2
mutS homolog 2.
  
0.999
Pcna
Proliferating cell nuclear antigen.
  
 0.999
Pms2
PMS1 homolog 2, mismatch repair system component.
  
 0.998
Mlh1
mutL homolog 1.
 
 0.998
Msh3
mutS homolog 3.
  
 
0.996
ENSMOCP00000004956
annotation not available
  
 0.993
Pms1
PMS1 homolog 1, mismatch repair system component.
  
 0.992
Rpa1
Replication protein A1.
   
 0.983
ENSMOCP00000006570
annotation not available
  
 0.974
Pold1
DNA polymerase delta 1, catalytic subunit.
  
 
 0.972
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.