STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101995741Zinc finger protein ZIC 4. (353 aa)    
Predicted Functional Partners:
Ak9
Adenylate kinase 9.
    
  0.858
Zic1
Zic family member 1.
  
  
0.855
Sufu
SUFU negative regulator of hedgehog signaling.
    
 0.598
Nanog
Nanog homeobox.
    
 0.596
Gtf3c3
General transcription factor IIIC subunit 3.
    
 0.587
Lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.575
Dner
Delta/notch like EGF repeat containing.
    
 0.573
Svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.560
Mrps11
Mitochondrial ribosomal protein S11.
    
  0.557
Mrps15
Mitochondrial ribosomal protein S15.
   
  0.553
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.