STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccser2Coiled-coil serine rich protein 2. (204 aa)    
Predicted Functional Partners:
Ndel1
nudE neurodevelopment protein 1 like 1.
    
 
 0.558
Dydc1
DPY30 domain containing 1.
      
 0.528
Nde1
nudE neurodevelopment protein 1.
    
 
 0.512
Tspan14
Tetraspanin 14.
      
 0.473
Dydc2
DPY30 domain containing 2.
      
 0.438
Ghitm
Growth hormone inducible transmembrane protein.
      
 0.433
Vwa8
Von Willebrand factor A domain containing 8.
      
 0.414
Ust
Uronyl 2-sulfotransferase.
      
 0.408
Luzp1
Leucine zipper protein 1.
      
 0.403
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.