STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc7a8Solute carrier family 7 member 8. (535 aa)    
Predicted Functional Partners:
Slc3a2
Solute carrier family 3 member 2.
  
 0.991
Slc3a1
Solute carrier family 3 member 1.
  
 0.879
Alkbh2
alkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
   
 0.798
6430548M08Rik
KIAA0513 ortholog.
   
 0.798
Lcn2
Lipocalin 2.
    
   0.790
Nudt12
Nudix hydrolase 12.
  
  0.692
Sod2
Superoxide dismutase 2.
    
 0.647
ENSMOCP00000007581
annotation not available
   
 0.641
LOC101984459
Alpha-amylase 1-like.
   
 0.641
LOC101985031
Alpha-amylase 1-like.
   
 0.641
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.