STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Prss42Serine protease 42, pseudogene. (338 aa)    
Predicted Functional Partners:
Met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.784
Mst1r
Macrophage stimulating 1 receptor (c-met-related tyrosine kinase).
    
  0.784
Ptk7
Protein tyrosine kinase 7 (inactive).
    
  0.700
Tfpi
Tissue factor pathway inhibitor.
    
  0.636
Spint2
Serine peptidase inhibitor, Kunitz type 2.
    
  0.591
Spint1
Serine peptidase inhibitor, Kunitz type 1.
    
  0.582
Sned1
Sushi, nidogen and EGF like domains 1.
    
  0.569
Wdr90
WD repeat domain 90.
    
 0.569
ENSMOCP00000018082
annotation not available
    
  0.566
ENSMOCP00000024879
annotation not available
    
  0.566
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.