STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Senp3SUMO specific peptidase 3. (569 aa)    
Predicted Functional Partners:
Tex10
Testis expressed 10.
    
 0.969
Wdr18
WD repeat domain 18.
    
 0.965
Las1l
LAS1 like ribosome biogenesis factor.
   
 0.949
ENSMOCP00000000275
annotation not available
    
 0.893
Nol9
Nucleolar protein 9.
   
 0.879
Senp6
SUMO specific peptidase 6.
    
0.858
Nup153
Nucleoporin 153.
   
 0.839
Crebzf
CREB/ATF bZIP transcription factor.
   
 0.812
Rangap1
Ran GTPase activating protein 1.
    
 
 0.808
Senp7
SUMO1/sentrin specific peptidase 7.
    
0.766
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.