STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sim1SIM bHLH transcription factor 1. (765 aa)    
Predicted Functional Partners:
Arnt2
Aryl hydrocarbon receptor nuclear translocator 2.
    
 
0.931
Arnt
Aryl hydrocarbon receptor nuclear translocator.
    
 
0.901
Arntl2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
 
0.613
Arntl
Aryl hydrocarbon receptor nuclear translocator like.
   
 
0.606
Clock
Clock circadian regulator.
    
 
0.602
ENSMOCP00000002435
annotation not available
    
 
 0.602
ENSMOCP00000004287
annotation not available
    
 
 0.602
Ncoa1
Nuclear receptor coactivator 1.
    
 
0.602
Ncoa3
Nuclear receptor coactivator 3.
    
 
0.602
Ncoa2
Nuclear receptor coactivator 2.
    
 
0.602
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.