STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aar2AAR2 splicing factor. (42 aa)    
Predicted Functional Partners:
Prpf8
pre-mRNA processing factor 8.
    
 
 0.990
Snrnp200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 
 0.965
Ecd
Ecdysoneless cell cycle regulator.
    
 
 0.957
Eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.953
ENSMOCP00000019760
annotation not available
    
 
 0.953
Tssc4
Tumor suppressing subtransferable candidate 4.
    
 
 0.950
Cd2bp2
CD2 cytoplasmic tail binding protein 2.
   
 
 0.932
Ddx23
DEAD-box helicase 23.
    
 
 0.925
ENSMOCP00000017190
annotation not available
    
 
 0.910
Znhit2
Zinc finger HIT-type containing 2.
    
 
 0.875
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.