STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atg9bAutophagy related 9B. (926 aa)    
Predicted Functional Partners:
Ulk2
Unc-51 like autophagy activating kinase 2.
   
 0.980
Ulk1
Unc-51 like autophagy activating kinase 1.
   
 0.980
Wipi1
WD repeat domain, phosphoinositide interacting 1.
   
 0.945
Ulk3
Unc-51 like kinase 3.
   
 0.943
Wipi2
WD repeat domain, phosphoinositide interacting 2.
   
 0.940
Atg13
Autophagy related 13.
   
 0.926
Pdik1l
PDLIM1 interacting kinase 1 like.
   
 0.921
Stk35
Serine/threonine kinase 35.
   
 0.921
Atg2a
Autophagy related 2A.
   
 0.914
Atg2b
Autophagy related 2B.
   
 0.914
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.