STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adprhl1ADP-ribosylhydrolase like 1. (353 aa)    
Predicted Functional Partners:
Ube2f
Ubiquitin conjugating enzyme E2 F (putative).
    
 0.876
Ube2m
Ubiquitin conjugating enzyme E2 M.
    
 0.876
Cacul1
CDK2 associated cullin domain 1.
    
 0.863
Cul3
Cullin 3.
    
 0.863
Cul1
Cullin 1.
    
 0.863
Cul5
Cullin 5.
   
 0.801
Cul2
Cullin 2.
   
 0.790
Ubxn7
UBX domain protein 7.
     
 0.768
ENSMOCP00000008369
annotation not available
    
 0.763
Nedd8
NEDD8 ubiquitin like modifier.
    
 0.763
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.