STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rbm22RNA binding motif protein 22. (409 aa)    
Predicted Functional Partners:
Isy1
pre-mRNA-splicing factor ISY1 homolog.
   
 0.999
Xab2
XPA binding protein 2.
   
 0.999
Bud31
BUD31 homolog.
   
 0.999
Aqr
Aquarius intron-binding spliceosomal factor.
    
 0.998
Cdc40
Cell division cycle 40.
   
 
 0.991
Cdc5l
Cell division cycle 5 like.
   
 
 0.989
Snrnp200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 
 0.986
Crnkl1
Crooked neck pre-mRNA splicing factor 1.
   
 0.985
ENSMOCP00000004834
annotation not available
   
 0.985
ENSMOCP00000007323
annotation not available
   
 0.985
Your Current Organism:
Microtus ochrogaster
NCBI taxonomy Id: 79684
Other names: M. ochrogaster, prairie vole, prairie voles
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.